SiBELia 3.0.6 freeware

... will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. ...

Author Nikolay Vyahhi, Ilya Minkin
Released 2015-01-21
Filesize 5.40 MB
Downloads 454
OS Windows XP, Windows Vista, Windows 7, Windows 8
Installation Instal And Uninstall
Keywords genome analyzer, analyze genome, genome finder, genome, analyzer, gene
Users' rating
(13 rating)
SiBELiaCADWindows XP, Windows Vista, Windows 7, Windows 8
SiBELia - genome Freeware Download Notice

SiBELia Free Download - we do not host any SiBELia torrent files or links of SiBELia on rapidshare.com, depositfiles.com, megaupload.com etc. All SiBELia download links are direct SiBELia download from publisher site or their selected mirrors.

SiBELia freeware - The Latest User Reviews
SiBELia freeware - The Latest Versions History
3.0.6 Jan 21, 2015 New Release Fixed a bug with crash when 0 simplificaiont stages specified
When both --graphfile" and --visualize are set, graph is output at each stage
Added commandline option --noblocks
3.0.5 Jun 23, 2014 New Release Removed commandline options: -a, --alignment
Added commandline options: --maf
Added the third parameters set "far"
Changed permissions of LAGAN scripts to run on some platforms
Changed structure of the directory "share" (Linux platforms only)
Fixed a bug with misorder of aligned repeats (affected -a option of C-Sibelia only)
Fixed some compiler warnings yielded by LAGAN sources
Fixed a bug in hierarchy circos output that resulted in uncompilable configs for some datasets
3.0.4 Oct 5, 2013 New Release · Fixed a bug in C-Sibelia: incorrect reporting of variants within synteny blocks having opposite directions
· Added output of synteny blocks in GFF format
· Removed sequences without synteny blocks from Circos diagrams
· Blocks orientations are depicted on Circos diagram by different colors
· Added Sibelia cmd options: --nopostprocess, --allstages, --correctboundaries, gff, --lastk
· Added C-Sibelia cmd options: -o, -a
· C-Sibelia outputs whole genome alignments in XMFA format (-o flag)
· Slightly changed "fine" parameters simplification set

Most popular CAD freeware downloads

FONZIE

12.2010 freeware download

... the marker as a single copy in the genome) using BLAST2.0, 5) design minisatellite primer pairs via ... of the approach was performed using the whole genome sequence of the phytopathogenic fungus Leptosphaeria maculans, showing ...

GNomEx

5.3.2 freeware download

GNomEx is Genomic LIMS and Analysis Project Center designed by the Huntsman Cancer Institute for use by microarray and next generation sequencing core facilities and large ...

sRNA Workbench

4.5.1 freeware download

... their precursors from an sRNA dataset and a genome. SiLoCo (Short interfering RNA Locus Comparison): compares sRNA expression levels in multiple samples by grouping sRNAs ...

GenomeView

2450 freeware download

GenomeView is a next-generation stand-alone genome browser and editor initiated in the BSB group at VIB ...

Integrated Genome Browser

7.0.4 B15225 freeware download

The Integrated Genome Browser (IGB, pronounced Ig-Bee) is an interactive, zoomable, ... program you can use to visualize and explore genome-scale data sets, such as tiling array data, next-generation ...

Celera Genome Browser

5.1 freeware download

The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006. ...

Celera Genome Browser for Linux

5.1 freeware download

The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006. ...

GiTools

2.2.2 freeware download

Gitools, is a framework for analysis and visualization of genomic data. Data and results are represented as browsable heatmaps. Gitools allows to import data directly from ...

PyCogent

1.5.3 freeware download

PyCogent was created as an open source library that can be used in genomic biology. PyCogent is a tool that comes included with controllers ...

Seq Monk

0.24.1 freeware download

... · Visualisation of mapped regions against an annotated genome. · Flexible quantitation of the mapped data to ... interest · Creation of reports containing data and genome annotation ...