VarScan 2.4.6 freeware

The advent of massively parallel sequencing technologies has fundamentally changed the study of genetics. New platforms like the Illumina GAIIx and the Roche GS yield unprecedented levels of sequencing throughput. The analysis and interpretation of data from next-generation sequencing platforms presents a substantial informatics challenge. ...

Author Dan Koboldt
Released 2023-03-28
Filesize 123 kB
Downloads 622
OS Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11, Linux, Mac OS X
Installation Instal And Uninstall
Keywords SNP identifier, identify SNP, filter variant, identify, identifier, SNP
Users' rating
(9 rating)
VarScanCADWindows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11, Linux, Mac OS X
VarScan - frequency Freeware Download Notice

VarScan Free Download - we do not host any VarScan torrent files or links of VarScan on rapidshare.com, depositfiles.com, megaupload.com etc. All VarScan download links are direct VarScan download from publisher site or their selected mirrors.

VarScan freeware - The Latest User Reviews
VarScan freeware - The Latest Versions History
2.4.6 Mar 28, 2023 New Release
2.3.8 May 13, 2015 New Release VarScan v2.3.8 now incorporates false-positive filtering! This works for single-sample variant calls
or somatic/LOH/germline calls from the somatic command. Both native VarScan output format and VCF
format variant files are supported. SNVs and indels are both supported.
This new command replaces the functionality of the fpfilter.pl accessory script.
2.3.7 Jul 22, 2014 New Release Fixed the issue of zero-depth lines in single-sample pileups for VarScan copynumber
Fixed a similar issue causing inconsistent column output for multi-sample mpileups in VarScan mpileup2*
Multi-sample VCFs generated with VarScan v2.3.6 and earlier might be missing sample columns.

Most popular CAD freeware downloads

Fourier Transform Lab Student Edition

1.2 freeware download

... with the usefulness of processing images in the frequency domain for certain band filters etc. FEATURES: Forward & Inverse Fourier Transform Low-Pass ...

ApE for Mac OS X

2.0.30 Alpha freeware download

... Selects sites matching multiple criteria (union/intersection- cut frequency, site type) in all open windows. Selects sites that cut more often in one sequence than ...

VarScan

2.4.6 freeware download

... based on read counts, base quality, and allele frequencyh. Given data for a tumor-normal pair, VarScan also ... · Filters variants by coverage, read depth, variant frequency, and base quality · Determines somatic status (Somatic, ...

Sonnet Lite

18.53 freeware download

Sonnet Lite™ is a free feature-limited version of Sonnet's professional Sonnet Suites, which provides EM analysis to thousands of companies across the globe. Many major manufacturers ...

PyPedal

2.0.3 freeware download

... than offspring, etc.) Generating summary information such as frequency of appearance in the pedigree file Reordering and renumbering of pedigree files Computation of the numerator ...

PyPedal for Linux

2.0.3 freeware download

... than offspring, etc.) Generating summary information such as frequency of appearance in the pedigree file Reordering and renumbering of pedigree files Computation of the numerator ...

KEMET Spice

3.9.66 freeware download

... in analyzing the performance of these capacitors over frequency, temperature, ripple, and DC bias conditions. The capacitor types include ceramic (MLCC), tantalum, polymer, and aluminum ...

FilterCAD

3.00 freeware download

FilterCAD 3.0 is a computer aided design program to help users without special expertise in filter design to create filters using Linear Technology's monolithic filter ICs. ...

Geogiga Front End

9.0 freeware download

... trigger delay, assign geometry, mute seismic traces, run frequency filter, gain control, vertical stacking, and such. Some batch commands are available, such as the geometry ...

Antenna Design Calculator

2.3 freeware download

... antenna size required for a given gain and frequency. 3 dB and 10 dB beamwidths are also derived; the calculator additionally gives the far-field range ...