PyCogent 1.5.3 freeware

... framework for: controlling third-party applications; devising workflows; querying databases; conducting novel probabilistic analyses of biological sequence evolution; and generating publication quality graphics. ...

Author PyCogent Team
Released 2012-11-09
Filesize 3.20 MB
Downloads 313
OS Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64
Installation Instal And Uninstall
Keywords analyze genome, sequence analyzer, analyze sequence, sequence, genome, gene
Users' rating
(14 rating)
PyCogentCADWindows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64
PyCogent - databases Freeware Download Notice

PyCogent Free Download - we do not host any PyCogent torrent files or links of PyCogent on rapidshare.com, depositfiles.com, megaupload.com etc. All PyCogent download links are direct PyCogent download from publisher site or their selected mirrors.

PyCogent freeware - The Latest User Reviews
PyCogent freeware - The Latest Versions History
1.5.3 Nov 9, 2012 New Release New Features:
· Added a withoutLostSpans() method to Feature objects in cogent.core.annotation. Useful after projecting features from one aligned sequence across to another. Implemented for ordinary Features and SimpleVariables but not xxy_list Variables.

Changes:
· Make Span.remapWith() a little clearer in cogent.core.location.
· Tidy annotation remapping code in cogent.core.annotation and cogent.core.sequence so that new positions are only calculated once when slicing, projecting, or otherwise remapping parts of sequences. The old code was needlessly doing it twice.

Bug Fixes:
· Fixed bug in BLAT application controller (cogent.app.blat) which would drop some input sequences when running assign_dna_reads_to_protein_database.
· Prevent negative widths from arising in cogent.draw.compatibility when alignment is too wide.

Most popular CAD freeware downloads

Panoply for Mac

5.4.3 freeware download

... in netCDF, HDF, GRIB, and other types of databases, in order to generate geo-gridded plots. Since the application deploys on the Java Runtime, Panoply can ...

PyPedal

2.0.3 freeware download

... and saving them to, MySQL, Postgres, and SQLite databases Simulation of pedigrees using an algorithm derived from that in Matvec 1.1a ...

Open3DQSAR x64

2.24 freeware download

... molecular structures · Comprehensive output, including SDF molecular databases, 3D maps and many different plots to ease immediate evaluation of results in PyMOL, MOE, Maestro, ...

Cytoscape x64

3.10.0 freeware download

... additional file format support, scripting, and connection with databases. Plugins may be developed by anyone using the Cytoscape open API based on Java™ technology and ...

RADlab

1.03 freeware download

... the environments the cross-section data from the same databases is used. Moreover one needs some shielding material ... the environments the cross-section data from the same databases is used. Moreover one needs some shielding material ...

enCIFer for Linux

1.4 freeware download

... files are format-compliant for deposition with journals and databases or for storage in laboratory archives. enCIFer should also be used to add information safely to ...

Melanie Viewer

7.0.7 freeware download

... also be used to view annotated gels from databases such as SWISS-2DPAGE, or any other image files with an appropriate format (.tif, .gel, etc.). ...

Jmol

14.31.53 freeware download

... for development of web-based courseware and web-accessible chemical databases. The JmolApplet provides an upgrade path for users of the Chime plug-in. · The Jmol application ...

Jmol for Linux

14.31.53 freeware download

... for development of web-based courseware and web-accessible chemical databases. The JmolApplet provides an upgrade path for users of the Chime plug-in. · The Jmol application ...

FreeDiams for Mac OS X

1.0.0 freeware download

... line parameters. FreeDiams can manage multiple drugs databases. Some drugs databases are already available: French (sources: AFSSAPS) Canadian ... Africa Ability to add your own drugs database Databases are compatible with the ATC classification Full Internationalization ...