Navigation: 

PyCogent 1.5.3 freeware

freeware screenshot
View Image

... querying databases; conducting novel probabilistic analyses of biological sequence evolution; and generating publication quality graphics. ...

Author PyCogent Team
Released 2012-11-09
Filesize 3.20 MB
Downloads 305
OS Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64
Installation Instal And Uninstall
Keywords analyze genome, sequence analyzer, analyze sequence, sequence, genome, gene
Users' rating
(11 rating)
PyCogentCADWindows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64
Add to saved freeware Report spyware
PyCogent - analyze sequence Freeware Download Notice

PyCogent Free Download - we do not host any PyCogent torrent files or links of PyCogent on rapidshare.com, depositfiles.com, megaupload.com etc. All PyCogent download links are direct PyCogent download from publisher site or their selected mirrors.

PyCogent freeware - The Latest User Reviews
PyCogent freeware - The Latest Versions History
1.5.3 Nov 9, 2012 New Release New Features:
· Added a withoutLostSpans() method to Feature objects in cogent.core.annotation. Useful after projecting features from one aligned sequence across to another. Implemented for ordinary Features and SimpleVariables but not xxy_list Variables.

Changes:
· Make Span.remapWith() a little clearer in cogent.core.location.
· Tidy annotation remapping code in cogent.core.annotation and cogent.core.sequence so that new positions are only calculated once when slicing, projecting, or otherwise remapping parts of sequences. The old code was needlessly doing it twice.

Bug Fixes:
· Fixed bug in BLAT application controller (cogent.app.blat) which would drop some input sequences when running assign_dna_reads_to_protein_database.
· Prevent negative widths from arising in cogent.draw.compatibility when alignment is too wide.

Most popular CAD freeware downloads

Seq Monk

0.24.1 freeware download

... application designed to enable you to visualize and analyze mapped sequence data. It was written for use with mapped next generation sequence data but can in theory be used for ...

WinBlast

0.2.0 freeware download

WinBlast is a handy, easy to use application specially designed to offer you a graphical front-end for NCBI BLAST. ...

miRPI

1.0 freeware download

... is faster and generally follows AB initio and sequence alignment methods. Here we developed MIRPI, a new ... finds highly conserved miRNAs from the given gene sequences by using non-repeated miRNAs of the users interest. ...

Gene Runner

6.5.49 Beta freeware download

Gene Runner saves the information on Amino Acids in tables and this data is also be used with the 'Protein Analysis' functions, the 'Suppressor' and the ...

SeqView

1.3 freeware download

... application specially designed to help you view and analyze sequence files with just a few click. You can select to view SEG, RGB, BGR sequences. So, if you needed a bioinformatics tool to ...

TARQUIN

4.3.6 freeware download

... construction optimised for the investigation of particular pathologies sequence parameters. Includes both GUI (see below for screenshot) and command line interface for one-off and batch ...

PyCogent

1.5.3 freeware download

... and generalized probabilistic techniques for working with biological sequences. Furthermore, PyCogent is an utility that allows you to perform codon alignments. New methods of ...

TARQUIN for Linux

4.3.6 freeware download

... construction optimised for the investigation of particular pathologies sequence parameters. Includes both GUI (see below for screenshot) and command line interface for one-off and batch ...